rs29591133 SNP Detail

Summary

• ID
  rs29591133
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86578528 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTC AGGGATGTCT GATTAAAACA
  R
  AACAGAACAA TCAAGCAGCC TTCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss46322094	mCV23664596	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss136760242	ENSMUSSNP6330336	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
ss323057517	CHEV_9_86590508	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs29591133					SNP	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86578528 () rs orientation: forward

Symbol	Name	Function Class
A330041J22Rik	RIKEN cDNA A330041J22 gene	within coordinates
Cpgi22104	CpG island 22104	106 bp distal
Me1	malic enzyme 1, NADP(+)-dependent, cytosolic	561 bp upstream
Rr205233	regulatory region 205233	508 bp proximal
Rr206830	regulatory region 206830	within coordinates
Tssr90786	transcription start site region 90786	819 bp upstream
Tssr90787	transcription start site region 90787	797 bp upstream
Tssr90788	transcription start site region 90788	686 bp upstream
Tssr90789	transcription start site region 90789	621 bp upstream
Tssr90790	transcription start site region 90790	517 bp upstream