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rs29591972 SNP Detail
Summary
  • ID
    rs29591972
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr3:107844913 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          AAAGGATTTT GATCTTACCA GATTAATAAA CATTTCTCAT
    CTATGAATGT TTATCTTATA AGCTTTTCAT TTTAATTAAT CATTTATTTC ACAGTGACCC
    R
    CACATCTGCC TATGAGTGCT TACTTCTTAA CTGCTGTAAC AGGCAGCAGC TGAGACTTGG
    CGTAAGGACA ATGCCCAGCA GGGCCATCCT CCAACATGTT                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
AKR/J
C3H/HeJ
DBA/2J
FVB/NJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss46860462 NES10716478 PERLEGEN MM_PANEL2 f SNP G G G A G A G G G
SNP Consensus Information
SNP Consensus Type
AKR/J
C3H/HeJ
DBA/2J
FVB/NJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs29591972 SNP G G G A G A G G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss46860462 NES10716478 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr3:107844913 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gstm6 glutathione S-transferase, mu 6 1250 bp downstream
Rr583091 regulatory region 583091 1842 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory