rs29592865 SNP Detail

Summary

• ID
  rs29592865
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107844994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCCAGTAG AGTCAGCATA
  AAGGATTTTG ATCTTACCAG ATTAATAAAC ATTTCTCATC TATGAATGTT TATCTTATAA
  GCTTTTCATT TTAATTAATC ATTTATTTCA CAGTGACCCG CACATCTGCC TATGAGTGCT
  TACTTCTTAA CTGCTGTAAC AGGCAGCAGC TGAGACTTGG CGTAAGGACA ATGCCCAGCA
  R
  GGCCATCCTC CAACATGTTC CAAGTTACAG GTAGGTCTCA CAAGAAGTGG TTGACAAAGG
  CTAGAATCCA TGATCTAGCC TCCATCAAAG GATGCTTCTT CAATGAATCT AGCTCCTTTG
  TGGGTGACCT GACAGCACCA ATCACACCCT GCTGCTCTGG GGCCTAGGGA AGTAGATCTG
  CCCATCTCCA ACCATTCACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46860465	NES10716479	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29592865					SNP	G	G	G	G	G	G	G	G	G	G	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46860465	NES10716479	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107844994 () rs orientation: forward

Symbol	Name	Function Class
Gstm6	glutathione S-transferase, mu 6	1169 bp downstream
Rr583091	regulatory region 583091	1761 bp proximal