rs29593654 SNP Detail

Summary

• ID
  rs29593654
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110464816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGACA TCAGCAGAAA GCTTCTTCAC
  R
  CCCTCCAGGG CAGGGCTCTG CCCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss46321036	mCV25039877	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss136958661	ENSMUSSNP594702	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss323193667	CHEV_9_110538252	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs29593654					SNP	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110464816 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22384	CpG island 22384	182 bp distal
Mir8107	microRNA 8107	251 bp downstream
Nbeal2	neurobeachin-like 2	within coordinates
Rr192758	regulatory region 192758	within coordinates
Rr198752	regulatory region 198752	1585 bp proximal
Rr202597	regulatory region 202597	506 bp proximal