rs29593764 SNP Detail

Summary

• ID
  rs29593764
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107845640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATTGAGT TTTTTGAAAA
  TTCCTACAAC GCAATCACCG ACAGTAGGGA ATGCTTATAG TAAACCATCT TGAAAAGAGA
  GAAAGATGGC TTCCAGGTGA GGGTAGATGT AAAACCTGGT GACTGTTCAC CCTCTGCCCA
  TCAGCCTAGC ACCTCTCGGA AGCAAGACTC ACAGGTGAGC ATGGCCAACG GAGGGACTGC
  R
  TGCACACTGC AGGATGACCA CACTGCAGGA TGATCACACT GCAGGATGAC CACACAGCTT
  GATGATGACT GAGAATTCTG GTATAGAAGA CACACCCACC TATAAGAACC CCAGGTGAAC
  ACTGCCAGGG CACATCATGA TTTCTCTCTT TTTAAAAAGA TTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ
ss46860474	NES10716482	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ
rs29593764					SNP	A	A	A	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46860474	NES10716482	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107845640 () rs orientation: forward

Symbol	Name	Function Class
Gstm6	glutathione S-transferase, mu 6	523 bp downstream
Rr583091	regulatory region 583091	1115 bp proximal