rs29593968 SNP Detail

Summary

• ID
  rs29593968
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62319502 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAAGA ACAGTGTTTT CTAGTTTTGT
  W
  TCATTTGTCT TAGAGTTTCT ATTGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46322410	mCV23519808	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss136549488	ENSMUSSNP3850368	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322982282	CHEV_9_62260027	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29593968					SNP	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62319502 () rs orientation: forward

Symbol	Name	Function Class
Rr196313	regulatory region 196313	1099 bp proximal
Rr196314	regulatory region 196314	1699 bp proximal
Rr201157	regulatory region 201157	within coordinates