rs29594058 SNP Detail

Summary

• ID
  rs29594058
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103291221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTGATCAAG TTGTTTCAAA
  TACACATTTA AGTCCTGATT CAGGACTTGA CTTAGAATTA GGGCCATTGC AAATATAATT
  AGCTAAGGTG AGCTCCTGAG TGGGCTGGGC TCTCATCCAA TGTGACTATG TTCTTTCTTT
  TTTTTCTCTC AAGAATTCAA TTAAATATTT ATTGAACAAA TATATCATAA ATGAGCTGAG
  R
  GGCATTTTCA TTTGAAGATA CAATAGACAA CTTCAAATAT TTGGCAGGCA GTCACATAAA
  GAATGAAAAG ATTTAATCAG CGTGTCTACT ACAAAAATCA AAGCTTAAAC CACAGGGTAA
  AGAGGAGCTG CAGACAGGCT GCAGGAGAGG TGGATAAAGC GCTCCATACT GCTTAGCATT
  GTCCTTTCCC ACACAACACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46319873	mCV25258180	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss136877693	ENSMUSSNP3330175	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29594058					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103291221 () rs orientation: forward

Symbol	Name	Function Class
D9Mgc25	DNA segment, Chr 9, MRC UK Mouse Genome Centre 25	267 bp proximal
D9Mit242	DNA segment, Chr 9, Massachusetts Institute of Technology 242	506 bp distal
Gm47328	predicted gene, 47328	within coordinates
Gm69201	predicted gene, 69201	within coordinates
Rr198513	regulatory region 198513	1621 bp distal
Rr198514	regulatory region 198514	1221 bp distal
Rr207103	regulatory region 207103	within coordinates