rs29594769 SNP Detail

Summary

• ID
  rs29594769
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:107847806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGAGGGA CAGTTTTACA
  CGTCCAGCTG GGCCCGATAC AGAGGGAAAT TCCAAAGCAT CTCAGTAAGG ACAAAGTACG
  ACCTCACTTC ATAGGGGACA CAATGGGAGC TGGAGGAATG GCGGGAGGAA AAAGCACACC
  CACCAAAAGA ACTCAAGATG AAGTCTTCCA CAGGAGCAGC CCTGAGTCAC AGTACTTCAC
  R
  GGTCAGCCAC AGGACTGACA ACACCAATCA AATATTACCA TGGAGTATGT CTTGGTCCTG
  CACATCAGTC TGCCTTTCTC TCAGCCTAAC GGTTGCAGGA ACAAACACAT TCTTCACATA
  ATCTGCATAC TGCAGGTCCT GGGCCGGAAA CCCAAGCTGT TTAAAGGCCT GACTTTCTTT
  TTGGCACAAA TCAGGAAGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46860489	NES10716358	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs29594769					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46860489	NES10716358	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107847806 () rs orientation: forward

Symbol	Name	Function Class
Gstm6	glutathione S-transferase, mu 6	Intron
Rr583091	regulatory region 583091	615 bp distal