rs29596174 SNP Detail

Summary

• ID
  rs29596174
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86426493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCA GCTTCTTCAA TCCTGCCCCC
  Y
  AATTCAACCA TAGGGGTCTC TGACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46321268	mCV24274695	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29596174					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86426493 () rs orientation: forward

Symbol	Name	Function Class
Dop1a	DOP1 leucine zipper like protein A	within coordinates
Rr211041	regulatory region 211041	693 bp distal
Tssr86395	transcription start site region 86395	790 bp upstream
Tssr86396	transcription start site region 86396	816 bp upstream