rs29599126 SNP Detail

Summary

• ID
  rs29599126
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108060830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGGTGTTAC CACAAAGCTT
  GCACTAATCC AACTTCTAAC ATGCGAAACA TACATTAGGT GTTCAGTGCA ATTCTTGTGA
  GTTGAATTAG ACTCAAATTG ACTAATTGAA TCCTGGCCAC AGAGTACAAA CTCCTGAAAT
  ATTCAGTCAG TCATCTGTGT GCCAGCCAGG GGATTCTCTT CTGAGGAGGA TAGCCCAGGC
  W
  CCTGAATTTT CGGCTTCCCT AACTTTGGAC AACTGCCTAG AGACTTGCCT CTCTCCAGGG
  AGATGTCAGA TTCTCATAAG ACAGTCTACC AGGGAAAATA AAATGTTTAA AAGAAATCCT
  ACTCTTTACA TCTTTACCCT TTACTCCCAG TCCCCCCCCC CCCTTACATC CATTCTACCT
  GGGAGTGGGG CCTAAAAGAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ
ss46862394	NES10707006	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ
rs29599126					SNP	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46862394	NES10707006	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108060830 () rs orientation: forward

Symbol	Name	Function Class
Gpr61	G protein-coupled receptor 61	Intron
Rr583152	regulatory region 583152	929 bp proximal
Rr583153	regulatory region 583153	1358 bp proximal
Tssr35129	transcription start site region 35129	1357 bp downstream