rs29601425 SNP Detail

Summary

• ID
  rs29601425
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78753375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAAAGTCT TAATTTAGCT
  GACACAGGAA ATCTGATGTT TTATCATGTT ACCTTTGTTA TAATGTTACC GTGTATGCTA
  TGCAAATGTT CTGCTTGTCA AATACAAATC GAATATTATT CCTGGAGCAT TTTTAAGAGG
  AGTCCAGCTG CCATTTGCTC AGTGCGCCCA TTTCTAACGA CAGAGTTACT TTCTTTTATC
  Y
  CTCTTCTGTA TAAAATTCTC CTGCCTGCAG ATCCCAAGTA GGGCTTGAAT GGGAAGCACA
  GCGTGTCCTG GAGTTCCTAG AATGTGTTTC TCTCATTTTC TTTTTTTTTC CCCCAGTCCG
  GCTCCCGAGT GACCACACAG GGCCTCCGGA GGCAGTCCAG CATGCAGATG GCAGGCTAAG
  CTGTGGTGTG ACTCTGTTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46323081	mCV24235066	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss136670532	ENSMUSSNP1905116	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29601425					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78753375 () rs orientation: forward

Symbol	Name	Function Class
Rr210878	regulatory region 210878	1826 bp proximal