rs29604545 SNP Detail

Summary

• ID
  rs29604545
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:108283228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAGTCAC TGGCTATGAT
  ACCCAGCTCT TCTGCTGTGT GCGTGCCTCT CCCAGGGTGA GTGAGGAGCT TCTCAGGTGG
  GGCTATCCTG TACTGCTTCC TGTCACTAGC CCATCCTAAC CTGAGCTATA TCACAGGGCA
  TCCTAATTGA ACATCTGCTA CCAGAGCCAC CATTTGTCTC CTTGACAGCA GGTTACTTAG
  R
  CACTGTCAGG AAGGGCATCT GTAATTCAAG ATGGATGGAT GGAAATGGTG TTCCTTTGGA
  GTGTTGGGTC CTCGTGTACA AAGACGTCAC TTCCAGCTAG TTATCTGCCA GTAGTGTCTG
  ATTCCCGCTG GTTTCTCTTT ATTCATTCCC CATGCCTTGT CTGCTCAGGG CTGTGGACAT
  GCATACTGCT CTGCTTGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46864353	NES10698358	PERLEGEN	MM_PANEL2	f	SNP	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29604545					SNP	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46864353	NES10698358	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108283228 () rs orientation: forward

Symbol	Name	Function Class
Mybphl	myosin binding protein H-like	Intron
Rr583218	regulatory region 583218	896 bp proximal