rs29605793 SNP Detail

Summary

• ID
  rs29605793
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:43358339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCCTCTT GTCCCTACTT
  CCTTAGGGCA GGGATTATGG AAATGTGCTA TCACGCCTAT TTGGGTGGTG GTGGTTGTCC
  TCTGAGACAG GGTTGCAGGT GTTTAAACTG GCCTTGCACT CACTATATTG CCAAACCCAA
  CCTTGAATCA TCTTCCACAC ATGCACCCTG GTGTTGCATA TGGAGCTCCG AGAACTGCTT
  R
  CAGGAGTGAG TTCTGGAGAG TAAGCACCGG CCATTGCGCT TGGCGGCAAG CCCCTTCATC
  TTAGCCATCT CTCCTAGATA AATCACACAC ATACACACAC ACACACACAC AGACACACAC
  ACACACACAA AAGCATTCAC TGACAAAAAT GGGTGGTTTT GGTCTTGTGA GCATCACTGT
  GCATTCTGCC CTTTCCTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47861297	NES11964633	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29605793					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47861297	NES11964633	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:43358339 () rs orientation: forward

Symbol	Name	Function Class
Bend3	BEN domain containing 3	within coordinates
Rr430778	regulatory region 430778	1562 bp distal
Rr430780	regulatory region 430780	964 bp distal
Rr430781	regulatory region 430781	494 bp distal
Rr430782	regulatory region 430782	955 bp proximal