rs29611870 SNP Detail

Summary

• ID
  rs29611870
• Variation Type
  SNP
• Alleles
  C/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:71880990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTT ATAAGGACAA CATTTAATTG
  B
  GGCTGGCTGA CAGGTTCAGA GGTTC                                      
  
  B = C/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39100226	mCV22797996	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss144609279	ENSMUSSNP135842	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
ss324424863	CHEV_13_71870319	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29611870					SNP	C	C	T	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:71880990 () rs orientation: forward

Symbol	Name	Function Class
Gm40999	predicted gene, 40999	within coordinates
Rr1731	regulatory region 1731	663 bp proximal
Rr280205	regulatory region 280205	within coordinates
Rr284862	regulatory region 284862	1211 bp proximal