rs29619499 SNP Detail

Summary

• ID
  rs29619499
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66056863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCT GCATGCAGAA GAGTGCAAAT
  W
  GATCCATACT TATTATCTCC CTGCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss39597035	mCV23206773	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss147322706	ENSMUSSNP3862376	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss325658637	CHEV_18_66083446	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs29619499					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66056863 () rs orientation: forward

Symbol	Name	Function Class
Gm50118	predicted gene, 50118	1424 bp downstream
Gm50119	predicted gene, 50119	264 bp downstream
Rr346799	regulatory region 346799	1263 bp distal
Rr346800	regulatory region 346800	538 bp proximal
Rr353052	regulatory region 353052	1462 bp distal
Rr353053	regulatory region 353053	937 bp proximal
Rr393825	regulatory region 393825	421 bp upstream