rs29622080 SNP Detail

Summary

• ID
  rs29622080
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47446910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTAAGGT CCAACTCTGT
  TGAGCACTTA AGGTTTACTT AGCCTTCTCA GGGCTTGGTG AAGATCACAC CCCACCTCTA
  CACATGTGAC TACAGACAAC TAGTCAGTGT TGAATGGCAA GAAATAATCT TTTTCAGGAA
  ATATTTCTCC AATCAAGCAT GCAATACCAA ATGTTCTGCC CTGGAACCAT ATACATACAA
  R
  TAATATTATA TAGATTGAGC AGCTTGCACA TATATATATA TATATATATA TATATATATA
  TATATATATA TATATGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  AGTGTGTGTG TGTGTGTGTG TGTATACACA TATGTATGTA TATATATATA TATATATATA
  TATATATATA TACTCTTTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45347508	mCV25125661	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss146510182	ENSMUSSNP5594569	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs29622080					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47446910 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	within coordinates