rs29622895 SNP Detail

Summary

• ID
  rs29622895
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:17905720 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTG GCCTTTGTTA CTTCCCTGTC
  Y
  CTTCTCCTTG TCTTTTCTTG GCCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39596941	mCV25455734	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss146799118	ENSMUSSNP2800467	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
ss325543289	CHEV_18_17931172	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs29622895					SNP	C	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:17905720 () rs orientation: forward

Symbol	Name	Function Class
Tssr150152	transcription start site region 150152	709 bp upstream