rs29625433 SNP Detail

Summary

• ID
  rs29625433
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66134204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTGAGTGGG AAAGAGAGAA GAGCAGACAG GCGGTGGACA
  GGTGCACGAG GGAAGAGCTG CCAACATGTG CACCATCGTT TCCAAAAGAA AAATACAAAG
  R
  GGAGGTCTGA AAGCTCCTGT TTGGTATCGT GTTCATCATC TTTGTGTAAG CAGAGCCACA
  CTATCTTGAC AGCATCCTAA ACCCAGAAGG CTTATAATA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39597880	mCV23116339	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss325658931	CHEV_18_66160787	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29625433					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66134204 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10156	CpG island 10156	934 bp proximal
Lman1	lectin, mannose-binding, 1	within coordinates
Rr353056	regulatory region 353056	within coordinates
Rr405704	regulatory region 405704	1414 bp upstream
Tssr153727	transcription start site region 153727	1479 bp downstream