rs29625437 SNP Detail

Summary

• ID
  rs29625437
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr18:57605145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTGA GCAGGCAAAA TTCAGAATAC
  W
  GTCTCCTGGT GTCCCTAGAT TCCAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss39599544	mCV23017253	ABI	CRAMUS_MOUSE	f	SNP	T	A	T
ss147182400	ENSMUSSNP107121	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss325633626	CHEV_18_57631727	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs29625437					SNP	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:57605145 () rs orientation: forward

Symbol	Name	Function Class
Ctxn3	cortexin 3	Intron
Tssr151204	transcription start site region 151204	390 bp upstream