rs29626826 SNP Detail

Summary

• ID
  rs29626826
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:146670396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGA GGTCTCCACT ACCACCTGTC
  W
  TGCCAGAGAT TTCTTTTCCT GCCTT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss45845387	mCV22607129	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss144657776	ENSMUSSNP3506786	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss321713922	CHEV_5_147545162	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs29626826					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:146670396 () rs orientation: forward

Symbol	Name	Function Class
Gm73162	predicted gene, 73162	within coordinates
Rr624745	regulatory region 624745	603 bp proximal
Rr624746	regulatory region 624746	612 bp proximal
Tssr54480	transcription start site region 54480	634 bp upstream
Usp12	ubiquitin specific peptidase 12	1223 bp downstream