rs29627257 SNP Detail

Summary

• ID
  rs29627257
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:74627583 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGCAGAGC AGAACCCTCT
  CTGCCCTACT TCAGTAATGT TATTAAATTT TAGTTAGAGT CTTTCTATTA TATGAAGACC
  GCTAGGAAGG CAGAGCCCAA ATGTTAGACA TCTTTGGTGC TTCTGGAGGC TGCATTGGGT
  TGGCATATAG CAGTGTGGGA AATAATGTTT ATTGGCAACA AATGGAGAGA GCAGATGGGA
  Y
  AAATAATCCC AAGTGCACCC GTAATCTGTC TACCCACAGA ACCATTGGAC TATGTGAAAC
  CGCTTTCATG GCCTTTGCTG CCAACAGCCT GCAGCTTGTT CTCTTTGAGA GCAACTCACT
  CTGAACCATT AAAGCCCCGC TGTCAACAGC GTCTTATAGG AGCCAATGAA AGATGTTTAA
  GTAAGAGCCG ACTTCCTTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss39597794	mCV25216380	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147478353	ENSMUSSNP1738339	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs29627257					SNP	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:74627583 () rs orientation: forward

Symbol	Name	Function Class
1700120E14Rik	RIKEN cDNA 1700120E14 gene	1166 bp downstream
Myo5b	myosin VB	within coordinates