rs29632192 SNP Detail

Summary

• ID
  rs29632192
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59788345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTATAATT TTTTTTTCAT GATGGGGTTT CTCTGTGCAT
  CTCTCTGGTG GCTGTCCAGG AACTTGCTTT GTACACCAGA CCGGCCTTGA ACTCAAAGAT
  Y
  CTCCTGCTTC TGCCTCCACA GTGAGTGCTG GGATTAAAAG TGTGCACCAC CATGCCTGGC
  TGCAGGACCA TTTTAACTAA AACAAAAATA AAAGGACTG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39102639	mCV23287393	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss324357473	CHEV_13_59741892	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29632192					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59788345 () rs orientation: forward

Symbol	Name	Function Class
Golm1	golgi membrane protein 1	within coordinates
Tssr4093	transcription start site region 4093	294 bp upstream
Tssr122874	transcription start site region 122874	359 bp upstream
Tssr122875	transcription start site region 122875	342 bp upstream