rs29633541 SNP Detail

Summary

• ID
  rs29633541
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54569629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGGC CATTTGGGGA CACCTAGACA
  S
  AAGCAAGGGT TTGCCCCTTT AGTTT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46324002	mCV24161070	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	C
ss136506926	ENSMUSSNP3888525	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		C
ss322965583	CHEV_9_54510152	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29633541					SNP	C	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54569629 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	475 bp upstream
Rr204171	regulatory region 204171	1962 bp proximal
Rr206444	regulatory region 206444	428 bp distal
Tssr89653	transcription start site region 89653	629 bp upstream
Tssr89654	transcription start site region 89654	490 bp upstream
Tssr89655	transcription start site region 89655	433 bp upstream