rs29633897 SNP Detail

Summary

• ID
  rs29633897
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:101691465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAATGCAA AAAGCCAAAT
  GAAACAATCA TCCAGTCGTC ACAACAAGCA AACATGGACT CCCATTTGTG TTAACCAGCC
  ATTCCTGAGC CCAGGGCTTG CCTTCGAATG CTCTGATATG CCCAGTGCTG CTCCGTTGAA
  GAGAACTGAT TTTCATTCTT CCAGCAGCTG TCAGTTTCAA ACAGCTTCTA GGTTAAGGGT
  R
  GGACTTACTT CCATTGTGCT GGGATTTTGT CCAGCTTGAA CTTCACAGGT CTCCCGTGTG
  CTGTCACAGT CCCCATGAGT TCCTATGTGC TTCAGCTCTG TTGGGTCTGG AACATGATTC
  TCTAAAATCA TACTTACTAT ATACTGGTCA GAAGCTGGTC CTAGCTTATC ATACTAAGCT
  GCAAAGCAAG GCTAGGTAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39102055	mCV23722267	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29633897					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:101691465 () rs orientation: forward

Symbol	Name	Function Class
Gm36475	predicted gene, 36475	within coordinates
Gm47533	predicted gene, 47533	within coordinates
Tssr4154	transcription start site region 4154	1020 bp upstream