rs29634175 SNP Detail

Summary

• ID
  rs29634175
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134945114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCACACATAA CCAAGTACCA TTAATAGTGT CAGGGATTGG
  TGCTTGCCCA TTGGATGACT CTCAAATTTG GTCAGTTATT GGTTGGCCAA TCCCTCCATC
  W
  CTACTCCTTC CCCCATCCCT GAATTTCTTG TAGACAGAAT ATATTTGGGG TGGAAAGTTT
  TGTGGGTGAG TTGGTGTCCC TATGACTCTA TTCCTGCTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45348660	mCV22314319	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss320515736	CHEV_2_134928930	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs29634175					SNP	A	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134945114 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565720	regulatory region 565720	1424 bp distal
Rr565721	regulatory region 565721	811 bp distal