GATTA CTTTGTCATT TTTATACCCT K GTTGACATTG TCATTGTCAT ATGTA K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45846076 | mCV24857222 | ABI | CRAMUS_MOUSE | f | SNP | G | T | G | |||||||||||||||
ss47543595 | NES10315120 | PERLEGEN | MM_PANEL2 | f | SNP | T | G | T | T | T | G | G | G | T | T | G | G | T | G | G | |||
ss147805272 | ENSMUSSNP1653376 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | ||||||||||||||||
ss321457749 | CHEV_5_7184602 | CHEVERUD | SCREENING_POP | f | SNP | G | G | ||||||||||||||||
SNP Consensus Information | |||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs29634930 | SNP | T | G | T | T | T | G | T | G | G | T | T | G | G | G | T | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47543595 | NES10315120 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr5:7234602 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm72407 | predicted gene, 72407 | within coordinates | ||||||
Tssr50074 | transcription start site region 50074 | 1820 bp downstream | ||||||
Zfp804b | zinc finger protein 804B | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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