rs29635004 SNP Detail

Summary

• ID
  rs29635004
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:77186849 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCCTCAG CCACAACTCT
  GAACAATGAA TCTGCTATTT CAACCCCACC CGAATCTATT AACCTGCTCA GCCTCAGCCT
  TAGCCTCGTT TTGAGAAGAA TTCTGCCTAG GACTACAGAG TTCCACTCTG AAAGTTAGTA
  AAGGCCTGGC AAGATTGCTC AGTGGGCAGA AACGTTTGCC ATGCCACACT GGTGACTTGA
  R
  GACAGCCCAT TCAGCCCACA AGAAACTGGA TGCGGTAGCA CACATGTAAT CCTGCACTCC
  CATGGCATGA TGGGAAGTAG AGATGAAGCT GCTAAGAATC TCAGTGGCTA TCTGACCCAG
  AGCATAGAGG AGGCAAGAAA CGCAGGAGAG ACCCCTCTTC AGAAATCTGA AAGGGGAGAA
  CAGTTTTGTA AAAGTTGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46324485	mCV22299266	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss136655353	ENSMUSSNP71953	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
ss323012067	CHEV_9_77127374	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29635004					SNP	A	A	G	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77186849 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm53504	predicted gene, 53504			within coordinates
Mlip	muscular LMNA-interacting protein			Intron
				Noncoding-Transcript-Variant