rs29635321 SNP Detail

Summary

• ID
  rs29635321
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:108333033 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTAATCAC AAATGGGAGC
  AGCCTGGCTC TTTGTCCTCT TGTCCAGGCT GTTTCCCAGG GCTGAAGCCA AGGGGCCACG
  GAGCCTGCCT GGGCAGCCAG CTGCCACAGC AGGCAGAAGA GCCTCGGTGT TTCCCCCTTG
  TAGGCACCCA GTTTTGACAG GCTTACCAAG AGCAAGGTTA ACCAACTCCC TAGAAGAAAT
  R
  AGCACACGGC CTCTTTGCTT GCTTGGTACT GGGCCAAAGC AGTTGAGGTG GGCTGAGCTG
  AAGCCCTGTC ACAAGCAGGG TCATACTCAG CTCCCAACCT CTGCAAGTCA CTCTGAGCCA
  GACTCCCACC TGGCCACGCT ACCTCATTCT CCCACTCTGG GACAGGTATA ATCATGCCCC
  CACCCTACCT TCTGGGGCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46864729	NES10696623	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29635321					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46864729	NES10696623	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:108333033 () rs orientation: forward

Symbol	Name	Function Class
Rr583235	regulatory region 583235	827 bp distal
Rr583236	regulatory region 583236	within coordinates
Sars1	seryl-tRNA synthetase 1	within coordinates