rs29637914 SNP Detail

Summary

• ID
  rs29637914
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:98829359 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGAA CTTCGTGTCA TTGGTCTACT
  R
  TAGAACAATG ACTTGGCCTA TGAGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39102602	mCV24334914	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145056206	ENSMUSSNP442623	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss324500815	CHEV_13_99462806	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29637914					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:98829359 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6012	CpG island 6012	1847 bp proximal
Rr281821	regulatory region 281821	441 bp proximal
Tmem171	transmembrane protein 171	within coordinates
Tssr120815	transcription start site region 120815	529 bp downstream
Tssr123632	transcription start site region 123632	666 bp upstream
Tssr123633	transcription start site region 123633	634 bp upstream
Tssr123634	transcription start site region 123634	126 bp upstream
Tssr123635	transcription start site region 123635	117 bp upstream
Tssr123636	transcription start site region 123636	64 bp upstream
Tssr123637	transcription start site region 123637	44 bp upstream
Tssr123638	transcription start site region 123638	268 bp downstream
Tssr123639	transcription start site region 123639	1918 bp downstream
Tssr123640	transcription start site region 123640	1955 bp downstream
Tssr123641	transcription start site region 123641	1974 bp downstream