rs29638214 SNP Detail

Summary

• ID
  rs29638214
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:104730163 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCT CCACTAAATA ATGCCTTAGT
  S
  TTTCTTTGAT TCTTCTTATA CTTGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46326085	mCV24900690	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss136901022	ENSMUSSNP1011861	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss323170390	CHEV_9_104755294	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29638214					SNP	G	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:104730163 () rs orientation: forward

Symbol	Name	Function Class
Cpne4	copine IV	within coordinates
Rr198572	regulatory region 198572	238 bp proximal
Tssr86829	transcription start site region 86829	1493 bp upstream