rs29641481 SNP Detail

Summary

• ID
  rs29641481
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:34549053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGT ACCAGACTGA GTTGCTCAGA
  S
  ATGGGTAGGT TTGCAACAGT GTGGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46325545	mCV25036617	ABI	CRAMUS_MOUSE	f	SNP		C	C					G		C
ss61376794	NES16749972	PERLEGEN	MM_PANEL2	f	SNP	C		C	G	C	C	C		C	C	C	C		C	C	C		C
ss136286749	ENSMUSSNP5532074	ENSEMBL	ENSEMBL_Sanger	f	SNP			C							C
ss322896885	CHEV_9_34445342	CHEVERUD	SCREENING_POP	f	SNP													C				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29641481					SNP	C	C	C	G	C	C	C	G	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61376794	NES16749972	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:34549053 () rs orientation: forward

Symbol	Name	Function Class
Kirrel3	kirre like nephrin family adhesion molecule 3	within coordinates
Tssr84320	transcription start site region 84320	1449 bp downstream