rs29641559 SNP Detail

Summary

• ID
  rs29641559
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40989237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTTTTTTTG GATACTGAGA TCGCACCAAT TAAATTAAAA
  TGATGTGGTC TGGGCCACAT GAGTAGTGAG ACACTGCCTC CACCTCCAGT CCCCCCTCCC
  Y
  CCAAGAGAGT GGGATAATAA TTATATCCTC ACCAACTCTC ACGAGTAGGG TGAAGTGGTC
  AAACATGAGG AGCTGAGTTT GAATAATTGC CCCCTCTCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46326043	mCV24023796	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss322922272	CHEV_9_40886024	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29641559					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40989237 () rs orientation: forward

Symbol	Name	Function Class
D9Dcr138	DNA Segment, Chr 9, Derry C. Roopenian 138	1229 bp distal
Rr206246	regulatory region 206246	1363 bp proximal
Ubash3b	ubiquitin associated and SH3 domain containing, B	within coordinates