rs29644083 SNP Detail

Summary

• ID
  rs29644083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:62318775 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACA ATTCCTCCCT GCTTGGCACT
  R
  TTAGTCTCTT GTAGGCAAAA GGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
ss46325964	mCV23519781	ABI	CRAMUS_MOUSE	f	SNP	G	G	G					A		G
ss50718989	NES14253095	PERLEGEN	MM_PANEL2	f	SNP	G		G	A	A	G	G		G	G	G		G		G
ss136549470	ENSMUSSNP3279733	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G							G
ss322982274	CHEV_9_62259300	CHEVERUD	SCREENING_POP	f	SNP												G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NZW/LacJ	SM/J	WSB/EiJ
rs29644083					SNP	G	G	G	A	A	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50718989	NES14253095	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:62318775 () rs orientation: forward

Symbol	Name	Function Class
Rr196313	regulatory region 196313	1826 bp proximal
Rr201157	regulatory region 201157	626 bp proximal