rs29644157 SNP Detail

Summary

• ID
  rs29644157
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70636349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTTCAAA GTCTAGTGAT
  TCTGTTTATA ATTGATCATA ATACAGCAAA TTTTCCTGTT GCTCTGACTC CCATGATCTC
  CTTCCTGCCA GCACTAATCC TTTGTTCCTA AAGGCCAGGG TGAGGGTAGA CTTGCTTGAG
  TCAGCTCTCC CACCTGTTTC CTGGAAGATG AATGCTGTGT GTCTGCTGCT CTTTCCATCC
  Y
  TCCCAACCTT ACAAAGCTGG GGCTGGGGCT GGGGCTAGAT CAGAGGGGAT AGGGCTCTCA
  CACCGGAATT GCAGAGAAGC ATTTGGAGTC CTTCTCTACC TCTACATTCT TTGTTCTTTC
  TCCTCTTGGT TATTGTTATT TGGGCAACTT TGGAATAAAT AGAAATTTTC TTAGTTAAGG
  AACAAGTTGG TGGTATGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46326449	mCV25010261	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss136608717	ENSMUSSNP3125684	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29644157					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70636349 () rs orientation: forward

Symbol	Name	Function Class
Adam10	a disintegrin and metallopeptidase domain 10	within coordinates
Rr201557	regulatory region 201557	within coordinates
Rr201558	regulatory region 201558	1252 bp proximal
Tssr85932	transcription start site region 85932	843 bp upstream