rs29654680 SNP Detail

Summary

• ID
  rs29654680
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54567370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTTGAGTCA CAGAATAAGT CAGGAGCGGA GCCCGACTAG
  AGCTCAAGTC TGCTTTGCAG TCTGCTGCCA AGATGCCCTG GGATTTGTTC TGGGGTTACT
  R
  TGTCTGTGGT GTGTGTGCCC CTGGATCTCT GAAACCATCT TCATATATGA TCAAGGTCAA
  GGAAGAAGTC AAGGTCATCT TCAATTGCAC AGAGAGACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46328676	mCV24160764	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	A
ss136506893	ENSMUSSNP5753882	ENSEMBL	ENSEMBL_Sanger	f	SNP		A			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29654680					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54567370 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr206444	regulatory region 206444	1230 bp proximal
Tssr89653	transcription start site region 89653	1580 bp downstream
Tssr89654	transcription start site region 89654	1758 bp downstream
Tssr89655	transcription start site region 89655	1798 bp downstream