rs29662629 SNP Detail

Summary

• ID
  rs29662629
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr13:53292001 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACT AGTATGACAG TTATAGATTC
  R
  TAATTAAACT ACTTTTAATC AGCAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39104866	mCV23267642	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss149007870	ENSMUSSNP741671	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss324340311	CHEV_13_53233334	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29662629					SNP	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:53292001 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ror2	receptor tyrosine kinase-like orphan receptor 2			Intron
				Noncoding-Transcript-Variant
Rr388452	regulatory region 388452			886 bp upstream