rs29664336 SNP Detail

Summary

• ID
  rs29664336
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36392923 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTGATTTAC ATTTAAGTAT TCTCTGTGAT ATTTGCATTT
  ACATGATGTA TACAAATTAA TGAATTCAGT ATTCATTTTA AGATGCTAGA ACATGCCAAG
  K
  TGTTCTAAAC AAAATGATGG AAGGGAGATG GATATACAAT TCTGGGTATC AAGTCTTTGC
  AGAAGAACTG AGTCACTAGA ACAGCAAAAT GACTCCCCT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39105176	mCV22952754	ABI	CRAMUS_MOUSE	f	SNP	T	G					T
ss51094135	NES14363070	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	G	G		G	G	T	T		G	T	T	G		G
ss148872061	ENSMUSSNP6162075	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss324315983	CHEV_13_36300809	CHEVERUD	SCREENING_POP	f	SNP												G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs29664336					SNP	T	G	G	G	G	G	T	G	G	T	T	G	G	T	T	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51094135	NES14363070	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36392923 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	447 bp proximal
Rr283246	regulatory region 283246	1724 bp distal