rs29665486 SNP Detail

Summary

• ID
  rs29665486
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:55350806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCACCCTT AATCCAATCT
  GTACAGGGGG CATTTTTTCA ATTCACAGTC CCTCTTCCCA AATGACATTA GCTTCTGTCA
  AGCTGATATA AATTTAACAG AGACAGAAAC AGAAAGCAAG TTCACAGAGT CATATAAATT
  TTGTGTCTGA ACAATACAAA AAATATACAA TGTTTCTTCT CTTCTATCAA CACTGACCAG
  M
  ACTTCTTCCT ACTTTTCCTA AATAACTACT TTTTGCGGAA TCAAATCTCT ACTAACTTCA
  CAATTTCCTA TGGACACTGA TTTAACTAAC AATACTTAAT TATTTACCAG AGAGTCTTAT
  TAGAGATCAA TAAATAGATT TTACCAAGTT CAACAAATTA TAGTTTAAGA AGTACTGTCT
  TCATGAAACT GGGCATGTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss48374432	NES12215640	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs29665486					SNP	A	A	A	A	A	A	A	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48374432	NES12215640	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:55350806 () rs orientation: forward

Symbol	Name	Function Class
Rr392765	regulatory region 392765	1409 bp downstream