rs29665925 SNP Detail

Summary

• ID
  rs29665925
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:55495920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGTTTGG TTTTTAAGAA
  TAGAAGGAAG TATAATCATA ATAATTGGTT AAATATTTTA AATATATGGA ATAAAGAAAT
  TCAGGTCTTT GAACTCAAAT GTAGGAAACA AAGGCATGGA GATAGAGAGA ATACAAAGAA
  TGAGAAAAAT GCTTTAAAAT AAATTTGAAA GTCTATGCCA GGGAAGCACT CAGCTTTTTT
  K
  AATATGATCT ACACAGGAAT TCTGGAATTG CTTAGCCTTG TGTGACATAT TTAGAGCCTG
  GAAATGAACT TATACAGTAA GGAGAAGGGA AGTTAATTGA AGTTAAACAC ATAGGAGAGG
  ATGTTGGTTC AAGTTATATA AAGAGAAAGG GGATATATAT ACCCACAGGG ATATTAATCT
  CCATAAAATG GATAATCTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48374171	NES12285107	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29665925					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48374171	NES12285107	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:55495920 () rs orientation: forward

Symbol	Name	Function Class
Rr392767	regulatory region 392767	1360 bp downstream