rs29667865 SNP Detail

Summary

• ID
  rs29667865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:97727596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGTGA GTTGTATACC CTTTATAAAG
  Y
  CCTGCCATCA TGTTCCCCCA ACCCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39105015	mCV24944165	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss145037473	ENSMUSSNP356025	ENSEMBL	ENSEMBL_Sanger	f	SNP	T			C
ss324497252	CHEV_13_98361043	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29667865					SNP	T	T	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:97727596 () rs orientation: forward

Symbol	Name	Function Class
D13Mit147	DNA segment, Chr 13, Massachusetts Institute of Technology 147	1856 bp distal
Gm2379	predicted gene 2379	within coordinates
Rr274324	regulatory region 274324	within coordinates
Rr285535	regulatory region 285535	1196 bp distal
Rr388933	regulatory region 388933	860 bp downstream
Tssr120789	transcription start site region 120789	1113 bp downstream