rs29668618 SNP Detail

Summary

• ID
  rs29668618
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:113327293 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA AAATCTGTGA AATACAAAAT
  M
  GTTGAAAACT GCTTACTCAA GTCAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45349216	mCV23804324	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	C
ss147239909	ENSMUSSNP3412544	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
ss320461228	CHEV_2_113337105	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29668618					SNP	A	C	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:113327293 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fmn1	formin 1			Intron
				Noncoding-Transcript-Variant
Rr288	regulatory region 288			660 bp proximal
Rr562766	regulatory region 562766			1897 bp distal
Rr562768	regulatory region 562768			852 bp proximal
Rr562769	regulatory region 562769			1959 bp proximal