rs29668972 SNP Detail

Summary

• ID
  rs29668972
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:86818535 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTATTTTG AGGTGTTTGA TCCATTTAGA CTTGATTTTG
  ATCTTTAAAA TCTTAACAGA AAAAAATTCA ATTGAACTTC AATAAGAAAT TTTAATCATA
  M
  TTGGTGATAA AAAGACACTA AAATCTTTGT TTTATTGAGG GATTAAAGTT TTATCGTATG
  GACATAAACA CTTTTGCTAA AAGTCTTTTC ATTGCCTTT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45350613	mCV25121760	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A	C
ss146867567	ENSMUSSNP2670728	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C		C
ss320379627	CHEV_2_86828348	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29668972					SNP	A	A	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86818535 () rs orientation: forward

Symbol	Name	Function Class
Or5t16	olfactory receptor family 5 subfamily T member 16	51 bp downstream