rs29669402 SNP Detail

Summary

• ID
  rs29669402
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:125572045 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTGCCATC TTCTTTCTGT CTTAAGACAG ACAGAAAGAC
  TCAGGACAGA TGCACAGACC TCCAATGACT GTTCCCAGAC CTTTGAACCT GCGCGTGCCT
  R
  GCCAGGTTTG TAAACTGCCT GAAACACAAT GATGCTTTTT GCTTCTAACT TTCTTCTTTC
  TCAAAGCTGG ATTGTAGCTA GTGGCTCTTC CATGCCTAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45352801	mCV22613847	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147486205	ENSMUSSNP3425023	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs29669402					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125572045 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12201	CpG island 12201	1672 bp proximal
Rr397270	regulatory region 397270	1622 bp upstream
Rr564273	regulatory region 564273	1417 bp proximal