rs29670019 SNP Detail

Summary

• ID
  rs29670019
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:26012379 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATGCGCAG ACGCGCTGCC TCTGACCTGG CCAGCCAGGA
  GGGGTGTGTC CCCTGCGCCC TGGCCAGAGG CCAGTGTCAT CGGGGCTTTC CCTCCCGTGC
  R
  GGACGAACCC GGGGTCTCCT GTGGCCAGAG GACCCCAACG GGAAAGGAAG GCACTAGCGC
  ACCCGGAGTG CCAGTTTTGG CCGGGCCAGG GCCGGGCTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45349327	mCV25059846	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs29670019					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:26012379 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11338	CpG island 11338	within coordinates
Gm54107	predicted gene, 54107	456 bp upstream
Nacc2	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing	within coordinates
Rr56450	regulatory region 56450	within coordinates
Tssr23074	transcription start site region 23074	371 bp downstream
Tssr23075	transcription start site region 23075	402 bp downstream