rs29671070 SNP Detail

Summary

• ID
  rs29671070
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:126921577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTCCTGACT TCCTTGGTGA TGAACAGCAG TATGGAAGTG
  TAAGCTAAAT AAACCCTTTC CTCCCAACTG CTTCTTGGTC ATGATGTTCG TACAGGAATC
  R
  AAACCCTGAC TAAGACAGGA AGTAAGGTCA GGAACACAGA GGCAGAAGAA GCCTGGAGCC
  AGGAACTCTA GGAGAGACTG GAGGAAGGCA GTTTCCTGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45349343	mCV23164698	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
ss147518856	ENSMUSSNP1298800	ENSEMBL	ENSEMBL_Sanger	f	SNP		A			G
ss320499209	CHEV_2_126905393	CHEVERUD	SCREENING_POP	f	SNP						A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29671070					SNP	A	A	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:126921577 () rs orientation: forward

Symbol	Name	Function Class
Blvra	biliverdin reductase A	within coordinates
Rr38145	regulatory region 38145	1577 bp distal
Rr55562	regulatory region 55562	823 bp proximal
Tssr19977	transcription start site region 19977	732 bp downstream
Tssr19978	transcription start site region 19978	535 bp upstream
Tssr19979	transcription start site region 19979	580 bp upstream
Tssr19980	transcription start site region 19980	595 bp upstream
Tssr19981	transcription start site region 19981	812 bp upstream
Tssr19982	transcription start site region 19982	854 bp upstream
Tssr19983	transcription start site region 19983	912 bp upstream
Tssr19984	transcription start site region 19984	1899 bp upstream