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rs29671473 SNP Detail
Summary
  • ID
    rs29671473
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr5:118406964 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          CCTAAAAGTT CCTTAGCAGC CTCTGTTTGG AGCTATGCTG
    GCTCCTATAG GCTTATGCAG CGCCCTTCCC CCGTGCTGAA CACAAACCTT CCGGGTGGGT
    R
    TGAATCTGGA CGGCCCTTCA GACTAAGCTC CTTGGGCTCC ATCCTGGCAT CCAAACCTGC
    CTAGGTTTTT TGCCTGAAGT CTGAGCTTAG CGCTAACCC                       
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45849436 mCV23380133 ABI CRAMUS_MOUSE f SNP A A A G A
ss149162406 ENSMUSSNP2799722 ENSEMBL ENSEMBL_Sanger f SNP A A A
ss321662387 CHEV_5_118718908 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs29671473 SNP A A A G A G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr5:118406964 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm73266 predicted gene, 73266 344 bp upstream
Rr618848 regulatory region 618848 within coordinates
Rr618849 regulatory region 618849 295 bp proximal
Rr618850 regulatory region 618850 366 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory