rs29673753 SNP Detail

Summary

• ID
  rs29673753
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134943407 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAAGTTCTT GCTGTGATAA AGAAGCCATG TGCCTTTTCT
  TATGAAAGCC CACACAAAGA CATGCCCCGT GCTGCCAACA CTGGTTCTAG TGGGACCATT
  M
  CCATTCTTTC ACTCTGTTCC CCCCTTCTCT GGTTGTACGC GGGGCCGGCC CTCTTGAGAC
  AGAGGAACTT GCTCCATCTC AACCTACTGT GACTAATGG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45350581	mCV22314035	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss147641106	ENSMUSSNP1586340	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
ss320515730	CHEV_2_134927223	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs29673753					SNP	C	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134943407 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565720	regulatory region 565720	within coordinates
Rr565721	regulatory region 565721	462 bp proximal