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rs29676035 SNP Detail
Summary
  • ID
    rs29676035
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr18:67101166 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          AGACT TTGCTGAAAG ACTGTCCTGG
    Y
    TACAATAAGG TGAGAGATGG CAACA                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
ss39602213 mCV25058559 ABI CRAMUS_MOUSE f SNP T C T T
ss147343216 ENSMUSSNP3442139 ENSEMBL ENSEMBL_Sanger f SNP T C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
rs29676035 SNP T C T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr18:67101166 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi10165 CpG island 10165 856 bp proximal
Gm50164 predicted gene, 50164 within coordinates
Rr355164 regulatory region 355164 1566 bp distal
Rr356406 regulatory region 356406 402 bp distal
Rr393837 regulatory region 393837 1429 bp upstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory