rs29676962 SNP Detail

Summary

• ID
  rs29676962
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:32129609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGACAACTA GGGCTATACA AAGAAACTCT GTCTTGAACA
  ACAAACAAAC AAACAAACAA CCACCCCCCA AAAAAGAAAA AGGATAAATT TGAACAACAA
  M
  AAAAAATAAA GTTTGAAGCA CAAGGTGCTA CATGGAACTC CTCTTGTGTA CACTTTATAG
  TTAGACTTGA CTTCATGCAA GTTTTTGTTT GTTTGTTTG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39107129	mCV23989152	ABI	CRAMUS_MOUSE	f	SNP		C	A	C	A
ss49082420	NES12428888	PERLEGEN	MM_PANEL2	f	SNP	C					C		A	C	C		A
ss148842945	ENSMUSSNP6699498	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
ss324311000	CHEV_13_32037495	CHEVERUD	SCREENING_POP	f	SNP							A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs29676962					SNP	C	C	A	C	A	C	A	A	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49082420	NES12428888	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:32129609 () rs orientation: forward

Symbol	Name	Function Class
Gmds	GDP-mannose 4, 6-dehydratase	within coordinates
Rr275635	regulatory region 275635	1609 bp distal