rs29677905 SNP Detail

Summary

• ID
  rs29677905
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:67057145 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TGTTC TGAAGCAAGT GACAGCCTTA
  Y
  TATAGCTGTA AGAGGAAGCA TCAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss39107132	mCV23328749	ABI	CRAMUS_MOUSE	f	SNP	T	C				C		C
ss52646858	NES15464906	PERLEGEN	MM_PANEL2	r	SNP		G	G	G	G		G		G	G	G	G	A	G	G
ss149259013	ENSMUSSNP1589924	ENSEMBL	ENSEMBL_Sanger	r	SNP	A	G						G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs29677905					SNP	T	C	C	C	C	C	C	C	C	C	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52646858	NES15464906	PERLEGEN	MM_PANEL	r	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:67057145 () rs orientation: reverse

Symbol	Name	Function Class
Mterf3	mitochondrial transcription termination factor 3	within coordinates
Ramacl	RNA guanine-7 methyltransferase activating subunit like	within coordinates
Rr273407	regulatory region 273407	1345 bp distal